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Article

Joint haplotype assembly and genotype calling via sequential Monte Carlo algorithm.

BMC bioinformatics - 16 Jul 2015

Ahn Soyeon, Vikalo Haris

Abstract excerpt

BACKGROUND: Genetic variations predispose individuals to hereditary diseases, play important role in the development of complex diseases, and impact drug metabolism. The full information about the DNA variations in the genome of an individual is given by haplotypes, the ordered lists of single nucleotide polymorphisms (SNPs) located on chromosomes. Affordable high-throughput DNA sequencing technologies enable...

Topics

Algorithms
Animals
Genome
Genotype
Haplotypes
High-Throughput Nucleotide Sequencing
Humans
Internet
Monte Carlo Method
Polymorphism, Single Nucleotide
Sequence Analysis, DNA
User-Computer Interface

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Identifiers

PMID: 26178880
DOI: 10.1186/s12859-015-0651-8
PMCID: PMC4503296

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 29 Aug 2026. Prepared record publication-26178880-2026-08-29.1. Manifest publication-graph-cohort-2026-08-29.1.

Source receipt: PubMed via Helena Literature Corpus, retrieved 29 Aug 2026.

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