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Article

Single-copy gene based 50 K SNP chip for genetic studies and molecular breeding in rice.

Scientific reports - 26 Jun 2015

Singh Nisha, Jayaswal Pawan Kumar, Panda Kabita, Mandal Paritra, Kumar Vinod, Singh Balwant, Mishra Shefali, Singh Yashi, Singh Renu, Rai Vandna, Gupta Anita, Raj Sharma Tilak, Singh Nagendra Kumar

Abstract excerpt

Single nucleotide polymorphism (SNP) is the most abundant DNA sequence variation present in plant genomes. Here, we report the design and validation of a unique genic-SNP genotyping chip for genetic and evolutionary studies as well as molecular breeding applications in rice. The chip incorporates 50,051 SNPs from 18,980 different genes spanning 12 rice chromosomes, including 3,710 single-copy (SC) genes conserved...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 26111882
DOI: 10.1038/srep11600
PMCID: PMC4481378

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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