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kSNP3.0: SNP detection and phylogenetic analysis of genomes without genome alignment or reference genome.

Bioinformatics (Oxford, England) - 1 Sept 2015

Gardner Shea N, Slezak Tom, Hall Barry G

Abstract excerpt

UNLABELLED: We announce the release of kSNP3.0, a program for SNP identification and phylogenetic analysis without genome alignment or the requirement for reference genomes. kSNP3.0 is a significantly improved version of kSNP v2. AVAILABILITY AND IMPLEMENTATION: kSNP3.0 is implemented as a package of stand-alone executables for Linux and Mac OS X under the open-source BSD license. The executable packages, source...

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PMID: 25913206
DOI: 10.1093/bioinformatics/btv271

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 5 Sept 2026. Manifest publication-graph-cohort-2026-09-05.1.

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