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Article

Sequence-based prediction of transcription upregulation by auxin in plants.

Journal of bioinformatics and computational biology - 1 Feb 2015

Ponomarenko Petr M, Ponomarenko Mikhail P

Abstract excerpt

Auxin is one of the main regulators of growth and development in plants. Prediction of auxin response based on gene sequence is of high importance. We found the TGTCNC consensus of 111 known natural and artificially mutated auxin response elements (AuxREs) with measured auxin-caused relative increase in genes' transcription levels, so-called either "a response to auxin" or "an auxin response." This consensus was...

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PMID: 25666655
DOI: 10.1142/S0219720015400090

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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