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Molecular characterization of Indian Sugarcane streak mosaic virus isolates reveals recombination and negative selection in the P1 gene.

Gene - 15 Nov 2014

Parameswari B, Bagyalakshmi K, Chinnaraja C, Viswanathan R

Abstract excerpt

Sugarcane streak mosaic virus (SCSMV), a member of the genus Poacevirus is an important viral pathogen affecting sugarcane production in India. The P1 gene of ten Indian isolates was sequenced and compared with previously reported SCSMV isolates. Comparative sequence analysis revealed a high level of diversity in the P1 gene (83-98% nucleotide sequence identity; 87-100% amino acid sequence identity), and the...

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PMID: 25225126
DOI: 10.1016/j.gene.2014.09.021

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