Molecular variability of sugarcane streak mosaic virus in China based on an analysis of the P1 and CP protein coding regions.

doi:10.1007/s00705-013-1854-9

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Article

Molecular variability of sugarcane streak mosaic virus in China based on an analysis of the P1 and CP protein coding regions.

Archives of virology - 1 May 2014

He Zhen, Li Wenfeng, Yasaka Ryosuke, Huang Yingkun, Zhang Zhixiang, Ohshima Kazusato, Li Shifang

Abstract excerpt

Sequences of the protein 1 (P1) and coat protein (CP) coding regions of 22 sugarcane streak mosaic virus (SCSMV) isolates were determined. Phylogenetic analysis showed that SCSMV had at least three major lineages, and the lineages seemed to reflect geographical origin. The sudden expansions of the Chinese and Indian subpopulations were supported by calculations showing deviations from the neutral equilibrium...

Topics

China
Gene Expression Regulation, Viral
Genetic Variation
Mosaic Viruses
Phylogeny
Saccharum
Viral Proteins

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PMID: 24178307
DOI: 10.1007/s00705-013-1854-9

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