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Article

Polymorphism identification and improved genome annotation of Brassica rapa through Deep RNA sequencing.

G3 (Bethesda, Md.) - 12 Aug 2014

Devisetty Upendra Kumar, Covington Michael F, Tat An V, Lekkala Saradadevi, Maloof Julin N

Abstract excerpt

The mapping and functional analysis of quantitative traits in Brassica rapa can be greatly improved with the availability of physically positioned, gene-based genetic markers and accurate genome annotation. In this study, deep transcriptome RNA sequencing (RNA-Seq) of Brassica rapa was undertaken with two objectives: SNP detection and improved transcriptome annotation. We performed SNP detection on two varieties...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Source

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Identifiers

PMID: 25122667
DOI: 10.1534/g3.114.012526
PMCID: PMC4232532

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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