A reference genome for common bean and genome-wide analysis of dual domestications.

doi:10.1038/ng.3008

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Topics Community

Back to search

Article

A reference genome for common bean and genome-wide analysis of dual domestications.

Nature genetics - 1 Jul 2014

Schmutz Jeremy, McClean Phillip E, Mamidi Sujan, Wu G Albert, Cannon Steven B, Grimwood Jane, Jenkins Jerry, Shu Shengqiang, Song Qijian, Chavarro Carolina, Torres-Torres Mirayda, Geffroy Valerie, Moghaddam Samira Mafi, Gao Dongying, Abernathy Brian, Barry Kerrie, Blair Matthew, Brick Mark A, Chovatia Mansi, Gepts Paul, Goodstein David M, Gonzales Michael, Hellsten Uffe, Hyten David L, Jia Gaofeng, Kelly James D, Kudrna Dave, Lee Rian, Richard Manon M S, Miklas Phillip N, Osorno Juan M, Rodrigues Josiane, Thareau Vincent, Urrea Carlos A, Wang Mei, Yu Yeisoo, Zhang Ming, Wing Rod A, Cregan Perry B, Rokhsar Daniel S, Jackson Scott A

Abstract excerpt

Common bean (Phaseolus vulgaris L.) is the most important grain legume for human consumption and has a role in sustainable agriculture owing to its ability to fix atmospheric nitrogen. We assembled 473 Mb of the 587-Mb genome and genetically anchored 98% of this sequence in 11 chromosome-scale pseudomolecules. We compared the genome for the common bean against the soybean genome to find changes in soybean...

Topics

Central America
Chromosome Mapping
Chromosomes, Plant
Crops, Agricultural
Genes, Plant
Genome, Plant
Humans

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Molecular Sequence Data

Phaseolus

Plant Leaves

Ploidies

Polymorphism, Single Nucleotide

Quantitative Trait Loci

Reference Standards

Seeds

Sequence Analysis, DNA

South America

Source

Open in PubMed Open full text

Identifiers

PMID: 24908249
DOI: 10.1038/ng.3008
PMCID: PMC7048698

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 31 Aug 2026.

Community interpretation

Discuss the evidence

Ask a question, add context or challenge an interpretation. Community activity is separate from scientific evidence strength.

discussions

replies

Citations encouraged

Claims remain attributable.

No discussion yet

Be the first to add a careful, cited interpretation.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

A reference genome for common bean and genome-wide analysis of dual domestications.PMID 24908249Read ↗

Genomic history of the origin and domestication of common bean unveils its closest sister species.Semantic proximity Read ↗

Comprehensive genomic resources related to domestication and crop improvement traits in Lima beanSemantic proximity Read ↗

The giant diploid faba genome unlocks variation in a global protein crop.Semantic proximity Read ↗

Adaptive gene loss in the common bean pan-genome during range expansion and domestication.Semantic proximity Read ↗

Genome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genes.Semantic proximity Read ↗

De novo assembly of soybean wild relatives for pan-genome analysis of diversity and agronomic traits.Semantic proximity Read ↗

Development and application of a novel genome-wide SNP array reveals domestication history in soybean.Semantic proximity Read ↗

Chromosome-level reference genome and resequencing of 322 accessions reveal evolution, genomic imprint and key agronomic traits in adzuki bean.Semantic proximity Read ↗

Landscape of genomic diversity and trait discovery in soybean.Semantic proximity Read ↗

Structure of genetic diversity in the two major gene pools of common bean (Phaseolus vulgaris L., Fabaceae).Semantic proximity Read ↗

Selection and adaptive introgression guided the complex evolutionary history of the European common bean.Semantic proximity Read ↗

High-quality genome assembly and pan-genome studies facilitate genetic discovery in mung bean and its improvement.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.