Article
Use of genotyping by sequencing data to develop a high-throughput and multifunctional SNP panel for conservation applications in Pacific lamprey.
Molecular ecology resources - 1 Jan 2015
Hess Jon E, Campbell Nathan R, Docker Margaret F, Baker Cyndi, Jackson Aaron, Lampman Ralph, McIlraith Brian, Moser Mary L, Statler David P, Young William P, Wildbill Andrew J, Narum Shawn R
Abstract excerpt
Next-generation sequencing data can be mined for highly informative single nucleotide polymorphisms (SNPs) to develop high-throughput genomic assays for nonmodel organisms. However, choosing a set of SNPs to address a variety of objectives can be difficult because SNPs are often not equally informative. We developed an optimal combination of 96 high-throughput SNP assays from a total of 4439 SNPs identified in a...
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