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fastSTRUCTURE: variational inference of population structure in large SNP data sets.

Genetics - 1 Jun 2014

Raj Anil, Stephens Matthew, Pritchard Jonathan K

Abstract excerpt

Tools for estimating population structure from genetic data are now used in a wide variety of applications in population genetics. However, inferring population structure in large modern data sets imposes severe computational challenges. Here, we develop efficient algorithms for approximate inference of the model underlying the STRUCTURE program using a variational Bayesian framework. Variational methods pose the...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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PMID: 24700103
DOI: 10.1534/genetics.114.164350
PMCID: PMC4063916

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