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Article

Identification accuracy and diversity reproducibility associated with internal transcribed spacer-based fungal taxonomic library preparation.

Environmental microbiology - 1 Sept 2014

Yamamoto Naomichi, Dannemiller Karen C, Bibby Kyle, Peccia Jordan

Abstract excerpt

This study investigated analytical parameters that are inherently relevant to identifying and quantifying fungal communities based on polymerase chain reaction amplicons. Specifically, we evaluated the accuracy of the BLASTn-based identification for internal transcribed spacer (ITS) sequences generated from pure cultures, and quantified the reproducibility of relative abundances as well as α and β diversity...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Source

Identifiers

PMID: 24237760
DOI: 10.1111/1462-2920.12338

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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