Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Cross-amplification and validation of SNPs conserved over 44 million years between seals and dogs.

PloS one - 1 Jan 2013

Hoffman Joseph I, Thorne Michael A S, McEwing Rob, Forcada Jaume, Ogden Rob

Abstract excerpt

High-density SNP arrays developed for humans and their companion species provide a rapid and convenient tool for generating SNP data in closely-related non-model organisms, but have not yet been widely applied to phylogenetically divergent taxa. Consequently, we used the CanineHD BeadChip to genotype 24 Antarctic fur seal (Arctocephalus gazella) individuals. Despite seals and dogs having diverged around 44...

Topics

Join the communities discussing this publication.

Dogs
Genotype
Phylogeny
Polymorphism, Single Nucleotide

Source

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Identifiers

PMID: 23874599
DOI: 10.1371/journal.pone.0068365
PMCID: PMC3712990

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 1 Sept 2026.

Community interpretation

Discuss the evidence

Ask a question, add context or challenge an interpretation. Community activity is separate from scientific evidence strength.

0

discussions

0

replies

Citations encouraged

Claims remain attributable.

No discussion yet

Be the first to add a careful, cited interpretation.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Cross-amplification and validation of SNPs conserved over 44 million years between seals and dogs.PMID 23874599Read ↗

An 85K SNP Array Uncovers Inbreeding and Cryptic Relatedness in an Antarctic Fur Seal Breeding Colony.Semantic proximity Read ↗

A 90K SNP array uncovers inbreeding and cryptic relatedness in an Antarctic fur seal breeding colonySemantic proximity Read ↗

Assessment of the functionality of genome-wide canine SNP arrays and implications for canine disease association studies.Semantic proximity Read ↗

RAD Sequencing and a Hybrid Antarctic Fur Seal Genome Assembly Reveal Rapidly Decaying Linkage Disequilibrium, Global Population Structure and Evidence for Inbreeding.Semantic proximity Read ↗

Genome sequence, comparative analysis and haplotype structure of the domestic dog.Semantic proximity Read ↗

Large-scale SNP genotyping with canine buccal swab DNA.Semantic proximity Read ↗

A draft fur seal genome provides insights into factors affecting SNP validation and how to mitigate them.Semantic proximity Read ↗

Genomic insights into six dog breeds owned in India: a ddRAD sequencing approach.Semantic proximity Read ↗

Marker panels for genealogy-based mapping, breed demographics, and inference-of-ancestry in the dog.Semantic proximity Read ↗

Rates of assay success and genotyping error when single nucleotide polymorphism genotyping in non-model organisms: a case study in the Antarctic fur seal.Semantic proximity Read ↗

Identification of genomic regions associated with phenotypic variation between dog breeds using selection mapping.Semantic proximity Read ↗

Transcriptomic SNP discovery for custom genotyping arrays: impacts of sequence data, SNP calling method and genotyping technology on the probability of validation success.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.