Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Transcriptome sequencing of sea cucumber (Apostichopus japonicus) and the identification of gene-associated markers.

Molecular ecology resources - 1 Jan 2014

Zhou Z C, Dong Y, Sun H J, Yang A F, Chen Z, Gao S, Jiang J W, Guan X Y, Jiang B, Wang B

Abstract excerpt

Sea cucumber (Apostichopus japonicus) is an ecologically and economically important species in East and South-East Asia. This project aimed to identify large numbers of gene-associated markers and differentially expressed genes (DEGs) after lipopolysaccharides (LPS) challenge in A. japonicus using high-throughput transcriptome sequencing. A total of 162 million high-quality reads of 174 million raw reads were...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Asia, Southeastern
Share to Computational Biology

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genetic Markers

Share to High-Throughput Nucleotide Sequencing

Share to Lipopolysaccharides

Share to Microsatellite Repeats

Share to Stress, Physiological

Share to Transcriptome

Source

Identifiers

PMID: 23855518
DOI: 10.1111/1755-0998.12147

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Transcriptome sequencing of sea cucumber (Apostichopus japonicus) and the identification of gene-associated markers.PMID 23855518Read ↗

Transcriptome sequencing and characterization for the sea cucumber Apostichopus japonicus (Selenka, 1867).Semantic proximity Read ↗

Draft genome of the sea cucumber Apostichopus japonicus and genetic polymorphism among color variants.Semantic proximity Read ↗

Transcriptome Analysis and Discovery of Genes Involved in Immune Pathways from Coelomocytes of Sea Cucumber (Apostichopus japonicus) after Vibrio splendidus Challenge.Semantic proximity Read ↗

Transcriptome analysis of tube foot and large scale marker discovery in sea cucumber, Apostichopus japonicus.Semantic proximity Read ↗

Characterization of fifteen SNP markers by mining EST in sea cucumber, Apostichopus japonicus.Semantic proximity Read ↗

Large-scale development of EST-SSR markers in sponge gourd via transcriptome sequencingSemantic proximity Read ↗

Construction of a High-Density Genetic Map and Quantitative Trait Locus Mapping in the Sea Cucumber Apostichopus japonicus.Semantic proximity Read ↗

Mapping of a major QTL for increased robustness and detection of genome assembly errors in Asian seabass (Lates calcarifer).Semantic proximity Read ↗

Effects of gut bacterial community on differential growth of sea cucumber (Apostichopus japonicus): Molecular mechanisms based on host-gut microbiome co-metabolismSemantic proximity Read ↗

Development of 101 gene-based single nucleotide polymorphism markers in sea cucumber, Apostichopus japonicus.Semantic proximity Read ↗

Chloroplast Pan-Genomes and Comparative Transcriptomics Reveal Genetic Variation and Temperature Adaptation in the Cucumber.Semantic proximity Read ↗

Effects of gut bacterial community on differential growth of sea cucumber (Apostichopus japonicus): Molecular mechanisms based on host-gut microbiome co-metabolismSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.