Article
A haplotype map of genomic variations and genome-wide association studies of agronomic traits in foxtail millet (Setaria italica).
Nature genetics - 1 Aug 2013
Jia Guanqing, Huang Xuehui, Zhi Hui, Zhao Yan, Zhao Qiang, Li Wenjun, Chai Yang, Yang Lifang, Liu Kunyan, Lu Hengyun, Zhu Chuanrang, Lu Yiqi, Zhou Congcong, Fan Danlin, Weng Qijun, Guo Yunli, Huang Tao, Zhang Lei, Lu Tingting, Feng Qi, Hao Hangfei, Liu Hongkuan, Lu Ping, Zhang Ning, Li Yuhui, Guo Erhu, Wang Shujun, Wang Suying, Liu Jinrong, Zhang Wenfei, Chen Guoqiu, Zhang Baojin, Li Wei, Wang Yongfang, Li Haiquan, Zhao Baohua, Li Jiayang, Diao Xianmin, Han Bin
Abstract excerpt
Foxtail millet (Setaria italica) is an important grain crop that is grown in arid regions. Here we sequenced 916 diverse foxtail millet varieties, identified 2.58 million SNPs and used 0.8 million common SNPs to construct a haplotype map of the foxtail millet genome. We classified the foxtail millet varieties into two divergent groups that are strongly correlated with early and late flowering times. We phenotyped...
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