Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Using PLINK for Genome-Wide Association Studies (GWAS) and data analysis.

Methods in molecular biology (Clifton, N.J.) - 1 Jan 2013

Rentería Miguel E, Cortes Adrian, Medland Sarah E

Abstract excerpt

Within this chapter we introduce the basic PLINK functions for reading in data, applying quality control, and running association analyses. Three worked examples are provided to illustrate: data management and assessment of population substructure, association analysis of a quantitative trait, and qualitative or case-control association analyses.

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Genome-Wide Association Study
Share to HapMap Project
Share to Metagenomics

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Models, Statistical

Share to Quality Control

Share to Quantitative Trait, Heritable

Share to Research Design

Share to Software

Source

Identifiers

PMID: 23756892
DOI: 10.1007/978-1-62703-447-0_8

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Using PLINK for Genome-Wide Association Studies (GWAS) and data analysis.PMID 23756892Read ↗

PLINK: Key Functions for Data Analysis.Semantic proximity Read ↗

Basic statistical analysis in genetic case-control studies.Semantic proximity Read ↗

Data Management and Summary Statistics with PLINK.Semantic proximity Read ↗

Genome-Wide Association Analysis Using R.Semantic proximity Read ↗

PLINK: a tool set for whole-genome association and population-based linkage analyses.Semantic proximity Read ↗

Candidate gene association analysis.Semantic proximity Read ↗

Exploring genotype-phenotype data using the GWAS CatalogSemantic proximity Read ↗

Statistical analysis for genome-wide association studySemantic proximity Read ↗

A tutorial on conducting genome-wide association studies: Quality control and statistical analysis.Semantic proximity Read ↗

Analysis of Genome-Wide Association Data.Semantic proximity Read ↗

The NHGRI GWAS Catalog, a curated resource of SNP-trait associations.Semantic proximity Read ↗

A tutorial on statistical methods for population association studies.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.