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StAMPP: an R package for calculation of genetic differentiation and structure of mixed-ploidy level populations.

Molecular ecology resources - 1 Sept 2013

Pembleton Luke W, Cogan Noel O I, Forster John W

Abstract excerpt

Statistical Analysis of Mixed-Ploidy Populations (StAMPP) is a freely available R package for calculation of population structure and differentiation based on single nucleotide polymorphism (SNP) genotype data from populations of any ploidy level, and/or mixed-ploidy levels. StAMPP provides an advance on previous similar software packages, due to an ability to calculate pairwise FST values along with confidence...

Topics

Computational Biology
Genetics, Population
Genotype
Ploidies
Polymorphism, Single Nucleotide
Software

Source

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Identifiers

PMID: 23738873
DOI: 10.1111/1755-0998.12129

Genes

FST

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 31 Aug 2026.

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