Article
Fine de novo sequencing of a fungal genome using only SOLiD short read data: verification on Aspergillus oryzae RIB40.
PloS one - 1 Jan 2013
Umemura Myco, Koyama Yoshinori, Takeda Itaru, Hagiwara Hiroko, Ikegami Tsutomu, Koike Hideaki, Machida Masayuki
Abstract excerpt
The development of next-generation sequencing (NGS) technologies has dramatically increased the throughput, speed, and efficiency of genome sequencing. The short read data generated from NGS platforms, such as SOLiD and Illumina, are quite useful for mapping analysis. However, the SOLiD read data with lengths of <60 bp have been considered to be too short for de novo genome sequencing. Here, to investigate...
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