Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

TrioVis: a visualization approach for filtering genomic variants of parent-child trios.

Bioinformatics (Oxford, England) - 15 Jul 2013

Sakai Ryo, Sifrim Alejandro, Vande Moere Andrew, Aerts Jan

Abstract excerpt

SUMMARY: TrioVis is a visual analytics tool developed for filtering on coverage and variant frequency for genomic variants from exome sequencing of parent-child trios. In TrioVis, the variant data are organized by grouping each variant based on the laws of Mendelian inheritance. Taking three Variant Call Format files as input, TrioVis allows the user to test different coverage thresholds (i.e. different levels of...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Child
Share to Computer Graphics
Share to Exome

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genomics

Share to High-Throughput Nucleotide Sequencing

Share to Parents

Share to Sequence Analysis, DNA

Share to Software

Source

Open in PubMed Open full text

Identifiers

PMID: 23658417
DOI: 10.1093/bioinformatics/btt267
PMCID: PMC3702247

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

TrioVis: a visualization approach for filtering genomic variants of parent-child trios.PMID 23658417Read ↗

VisVariant: A java program to visualise genetic variants in next-generation sequencing dataSemantic proximity Read ↗

Complex structural variant visualization with SVTopoSemantic proximity Read ↗

VSIM: Visualization and simulation of variants in personal genomes with an application to premarital testingSemantic proximity Read ↗

RareVariantVis: new tool for visualization of causative variants in rare monogenic disorders using whole genome sequencing data.Semantic proximity Read ↗

Trumpet plots: Visualizing The Relationship Between Allele Frequency And Effect Size In Genetic Association StudiesSemantic proximity Read ↗

ExonViz: A user friendly application to visualize transcripts and genetic variantsSemantic proximity Read ↗

SVPopEx: Population-Wide Visualization and Exploration of Structural VariantsSemantic proximity Read ↗

Visualizing the geography of genetic variants.Semantic proximity Read ↗

The personal genome browser: visualizing functions of genetic variants.Semantic proximity Read ↗

VCF.Filter: interactive prioritization of disease-linked genetic variants from sequencing data.Semantic proximity Read ↗

MetroNome — a visual data exploration platform for integrating human genotypic and phenotypic data across diseasesSemantic proximity Read ↗

Visualization tools for human structural variations identified by whole-genome sequencing.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.