Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Allele identification for transcriptome-based population genomics in the invasive plant Centaurea solstitialis.

G3 (Bethesda, Md.) - 1 Feb 2013

Dlugosch Katrina M, Lai Zhao, Bonin Aurélie, Hierro José, Rieseberg Loren H

Abstract excerpt

Transcriptome sequences are becoming more broadly available for multiple individuals of the same species, providing opportunities to derive population genomic information from these datasets. Using the 454 Life Science Genome Sequencer FLX and FLX-Titanium next-generation platforms, we generated 11-430 Mbp of sequence for normalized cDNA for 40 wild genotypes of the invasive plant Centaurea solstitialis, yellow...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Databases, Factual
Share to Gene Library
Share to Genetic Loci

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genome, Plant

Share to Introduced Species

Share to Metagenomics

Share to Software

Share to Transcriptome

Source

Open in PubMed Open full text

Identifiers

PMID: 23390612
DOI: 10.1534/g3.112.003871
PMCID: PMC3564996

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Allele identification for transcriptome-based population genomics in the invasive plant Centaurea solstitialis.PMID 23390612Read ↗

Population genomic analyses reveal a history of range expansion and trait evolution across the native and invaded range of yellow starthistle (Centaurea solstitialis).Semantic proximity Read ↗

De novo assembly and characterization of leaf transcriptome for the development of functional molecular markers of the extremophile multipurpose tree species Prosopis alba.Semantic proximity Read ↗

Design and evaluation of a sequence capture system for genome-wide SNP genotyping in highly heterozygous plant genomes: a case study with a keystone Neotropical hardwood tree genome.Semantic proximity Read ↗

High-quality genome assembly enables prediction of allele-specific gene expression in hybrid poplar.Semantic proximity Read ↗

High-quality assembly of the reference genome for scarlet sage, Salvia splendens, an economically important ornamental plant.Semantic proximity Read ↗

PISAD: reference-free intraspecies sample anomalies detection tool based on k-mer counting.Semantic proximity Read ↗

De novo transcriptome assembly and polymorphism detection in the flowering plant Silene vulgaris (Caryophyllaceae).Semantic proximity Read ↗

Targeted enrichment of the black cottonwood (Populus trichocarpa) gene space using sequence capture.Semantic proximity Read ↗

Allelic structural variation at the NLR25-1 locus enhances defense against Pseudomonas syringae in kiwifruit.Semantic proximity Read ↗

Development of genomic tools in a widespread tropical tree, Symphonia globulifera L.f.: a new low-coverage draft genome, SNP and SSR markers.Semantic proximity Read ↗

Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery.Semantic proximity Read ↗

Development of microsatellite markers and assembly of the plastid genome in Cistanthe longiscapa (Montiaceae) based on low-coverage whole genome sequencing.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.