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Genomic dissection of small RNAs in wild rice (Oryza rufipogon): lessons for rice domestication.

The New phytologist - 1 Nov 2012

Wang Yu, Bai Xuefei, Yan Chenghai, Gui Yiejie, Wei Xinghua, Zhu Qian-Hao, Guo Longbiao, Fan Longjiang

Abstract excerpt

The lack of a MIRNA set and genome sequence of wild rice (Oryza rufipogon) has prevented us from determining the role of MIRNA genes in rice domestication. In this study, a genome, three small RNA populations and a degradome of O. rufipogon were sequenced by Illumina platform and the expression levels of microRNAs (miRNAs) were investigated by miRNA chips. A de novo O. rufipogon genome was assembled using c. 55×...

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PMID: 22994911
DOI: 10.1111/j.1469-8137.2012.04304.x

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

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