Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Haplotype analysis improved evidence for candidate genes for intramuscular fat percentage from a genome wide association study of cattle.

PloS one - 1 Jan 2011

Barendse William

Abstract excerpt

In genome wide association studies (GWAS), haplotype analyses of SNP data are neglected in favour of single point analysis of associations. In a recent GWAS, we found that none of the known candidate genes for intramuscular fat (IMF) had been identified. In this study, data from the GWAS for these candidate genes were re-analysed as haplotypes. First, we confirmed that the methodology would find evidence for...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Adipose Tissue
Share to Cattle
Share to ADIPOQ gene

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to FASN gene

Share to Genome-Wide Association Study

Share to Haplotypes

Share to Muscle, Skeletal

Share to Polymorphism, Single Nucleotide

Source

Open in PubMed Open full text

Identifiers

PMID: 22216329
DOI: 10.1371/journal.pone.0029601
PMCID: PMC3247274

Genes

ADIPOQ
CAPN1
CXCR4
FASN

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Haplotype analysis improved evidence for candidate genes for intramuscular fat percentage from a genome wide association study of cattle.PMID 22216329Read ↗

A genome-wide association study of meat and carcass traits in Australian cattle.Semantic proximity Read ↗

Discovery of candidate genes for muscle traits based on GWAS supported by eQTL-analysis.Semantic proximity Read ↗

Genomic regions associated with muscularity in beef cattle differ in five contrasting cattle breeds.Semantic proximity Read ↗

Implementing meta-analysis from genome-wide association studies for pork quality traits.Semantic proximity Read ↗

A conserved haplotype in Wagyu cattle contains RAB4A whose encoded protein regulates glucose trafficking in muscle and fat cells.Semantic proximity Read ↗

Association between promoter polymorphisms in a key cytoskeletal gene (Ankyrin 1) and intramuscular fat and water-holding capacity in porcine muscle.Semantic proximity Read ↗

Searching for new loci and candidate genes for economically important traits through gene-based association analysis of Simmental cattle.Semantic proximity Read ↗

Putative regulatory factors associated with intramuscular fat content.Semantic proximity Read ↗

Associations of polymorphisms in four candidate genes with carcass and/or meat-quality traits in two meat-type chicken lines.Semantic proximity Read ↗

Association of polymorphisms in candidate genes with colour, water-holding capacity, and composition traits in bovine M. longissimus and M. semimembranosus.Semantic proximity Read ↗

A splice site single nucleotide polymorphism of the fatty acid binding protein 4 gene appears to be associated with intramuscular fat deposition in longissimus muscle in Australian cattle.Semantic proximity Read ↗

Regulatory polymorphisms in the bovine Ankyrin 1 gene promoter are associated with tenderness and intramuscular fat content.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.