Article
Segtor: rapid annotation of genomic coordinates and single nucleotide variations using segment trees.
PloS one - 1 Jan 2011
Renaud Gabriel, Neves Pedro, Folador Edson Luiz, Ferreira Carlos Gil, Passetti Fabio
Abstract excerpt
Various research projects often involve determining the relative position of genomic coordinates, intervals, single nucleotide variations (SNVs), insertions, deletions and translocations with respect to genes and their potential impact on protein translation. Due to the tremendous increase in throughput brought by the use of next-generation sequencing, investigators are routinely faced with the need to annotate...
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