Article
MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypes.
Genetic epidemiology - 1 Dec 2010
Li Yun, Willer Cristen J, Ding Jun, Scheet Paul, Abecasis Gonçalo R
Abstract excerpt
Genome-wide association studies (GWAS) can identify common alleles that contribute to complex disease susceptibility. Despite the large number of SNPs assessed in each study, the effects of most common SNPs must be evaluated indirectly using either genotyped markers or haplotypes thereof as proxies. We have previously implemented a computationally efficient Markov Chain framework for genotype imputation and...
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