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Using phylogenomic patterns and gene ontology to identify proteins of importance in plant evolution.

Genome biology and evolution - 12 Jul 2010

Cibrián-Jaramillo Angélica, De la Torre-Bárcena Jose E, Lee Ernest K, Katari Manpreet S, Little Damon P, Stevenson Dennis W, Martienssen Rob, Coruzzi Gloria M, DeSalle Rob

Abstract excerpt

We use measures of congruence on a combined expressed sequenced tag genome phylogeny to identify proteins that have potential significance in the evolution of seed plants. Relevant proteins are identified based on the direction of partitioned branch and hidden support on the hypothesis obtained on a 16-species tree, constructed from 2,557 concatenated orthologous genes. We provide a general method for detecting...

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Identifiers

PMID: 20624728
DOI: 10.1093/gbe/evq012
PMCID: PMC2997538

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

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