Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Is the secondary putative RNA-RNA interaction site relevant to GcvB mediated regulation of oppA mRNA in Escherichia coli?

Biochimie - 1 Oct 2010

Busi Florent, Le Derout Jacques, Cerciat Marie, Régnier Philippe, Hajnsdorf Eliane

Abstract excerpt

GcvB is a non-coding RNA that regulates oppA mRNA in different bacterial species by binding a GcvB GU-rich region named R1 to oppA mRNA. A secondary putative interaction site (PS1) was identified in this study that is able to form a second nearly perfect 10 base-pair duplex between these two RNAs in Escherichia coli. In this work, we have studied whether the formation of a second interaction site could help...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Amino Acid Oxidoreductases
Share to Carrier Proteins

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Share to Escherichia coli

Share to Escherichia coli Proteins

Share to Gene Expression Regulation, Bacterial

Share to Lipoproteins

Share to RNA, Bacterial

Share to RNA, Untranslated

Source

Identifiers

PMID: 20603180
DOI: 10.1016/j.biochi.2010.06.020

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence. Graph snapshot: 2026-09-29.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Is the secondary putative RNA-RNA interaction site relevant to GcvB mediated regulation of oppA mRNA in Escherichia coli?PMID 20603180Read ↗

The role of the small regulatory RNA GcvB in GcvB/mRNA posttranscriptional regulation of oppA and dppA in Escherichia coli.Semantic proximity Read ↗

Development of two compatible plasmids to assess sRNA-mediated post-transcriptional regulation in <i>Acinetobacter baumannii</i>Semantic proximity Read ↗

Two separate modules of the conserved regulatory RNA AbcR1 address multiple target mRNAs in and outside of the translation initiation region.Semantic proximity Read ↗

The RNA Domain Vc1 Regulates Downstream Gene Expression in Response to Cyclic Diguanylate in Vibrio cholerae.Semantic proximity Read ↗

Contribution of the second OB fold of ribosomal protein S1 from Escherichia coli to the recognition of TmRNA.Semantic proximity Read ↗

The functional Hfq-binding module of bacterial sRNAs consists of a double or single hairpin preceded by a U-rich sequence and followed by a 3' poly(U) tail.Semantic proximity Read ↗

Base Pairing Interaction between 5′- and 3′-UTRs Controls icaR mRNA Translation in Staphylococcus aureusSemantic proximity Read ↗

RsmA and the quorum-sensing signal, N-[3-oxohexanoyl]-L-homoserine lactone, control the levels of rsmB RNA in Erwinia carotovora subsp. carotovora by affecting its stability.Semantic proximity Read ↗

The gcvB gene encodes a small untranslated RNA involved in expression of the dipeptide and oligopeptide transport systems in Escherichia coli.Semantic proximity Read ↗

Processing of m1 RNA at the 3' end protects its primary transcript from degradation.Semantic proximity Read ↗

An archaeal RNA binding protein, FAU-1, is a novel ribonuclease related to rRNA stability in Pyrococcus and Thermococcus.Semantic proximity Read ↗

The small RNA GcvB regulates sstT mRNA expression in Escherichia coli.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.