Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Reverse-engineering the Arabidopsis thaliana transcriptional network under changing environmental conditions.

Genome biology - 1 Jan 2009

Carrera Javier, Rodrigo Guillermo, Jaramillo Alfonso, Elena Santiago F

Abstract excerpt

BACKGROUND: Understanding the molecular mechanisms plants have evolved to adapt their biological activities to a constantly changing environment is an intriguing question and one that requires a systems biology approach. Here we present a network analysis of genome-wide expression data combined with reverse-engineering network modeling to dissect the transcriptional control of Arabidopsis thaliana. The regulatory...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Algorithms
Share to Arabidopsis Proteins
Share to Cluster Analysis

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Ecosystem

Share to Gene Regulatory Networks

Share to Genome, Plant

Share to Oligonucleotide Array Sequence Analysis

Share to Stress, Mechanical

Source

Open in PubMed Open full text

Identifiers

PMID: 19754933
DOI: 10.1186/gb-2009-10-9-r96
PMCID: PMC2768985

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Reverse-engineering the Arabidopsis thaliana transcriptional network under changing environmental conditions.PMID 19754933Read ↗

Biotic-response networks are an important organizer of the transcriptome in wild <i>Arabidopsis thaliana</i> populationsSemantic proximity Read ↗

Mapping Transcriptional Networks in Plants: Data-Driven Discovery of Novel Biological Mechanisms.Semantic proximity Read ↗

Connecting genes, coexpression modules, and molecular signatures to environmental stress phenotypes in plants.Semantic proximity Read ↗

From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.Semantic proximity Read ↗

Gene Networks in Plant Biology: Approaches in Reconstruction and Analysis.Semantic proximity Read ↗

Polygenic pathogen networks influence transcriptional plasticity in the Arabidopsis-Botrytis pathosystem.Semantic proximity Read ↗

Machine learning-based differential network analysis: a study of stress-responsive transcriptomes in Arabidopsis.Semantic proximity Read ↗

Network-assisted crop systems genetics: network inference and integrative analysis.Semantic proximity Read ↗

Engineering microbial phenotypes through rewiring of genetic networks.Semantic proximity Read ↗

Neutral transcriptome rewiring promotes QDR evolvability at the species levelSemantic proximity Read ↗

A systems view of responses to nutritional cues in Arabidopsis: toward a paradigm shift for predictive network modeling.Semantic proximity Read ↗

Rewiring of transcriptional regulatory networks: hierarchy, rather than connectivity, better reflects the importance of regulators.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.