Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

The impact of sampling schemes on the site frequency spectrum in nonequilibrium subdivided populations.

Genetics - 1 May 2009

Städler Thomas, Haubold Bernhard, Merino Carlos, Stephan Wolfgang, Pfaffelhuber Peter

Abstract excerpt

Using coalescent simulations, we study the impact of three different sampling schemes on patterns of neutral diversity in structured populations. Specifically, we are interested in two summary statistics based on the site frequency spectrum as a function of migration rate, demographic history of the entire substructured population (including timing and magnitude of specieswide expansions), and the sampling...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Computer Simulation
Share to Demography
Share to Drosophila melanogaster

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Share to Genetic Variation

Share to Genetics, Population

Share to Linkage Disequilibrium

Share to Models, Genetic

Share to Solanum lycopersicum

Source

Open in PubMed Open full text

Identifiers

PMID: 19237689
DOI: 10.1534/genetics.108.094904
PMCID: PMC2674817

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence. Graph snapshot: 2026-09-29.

Research trail→

Click a neighbor to travelStep 1 · 10 closest

The impact of sampling schemes on the site frequency spectrum in nonequilibrium subdivided populations.PMID 19237689Read ↗

Influence of finite-sites mutation, population subdivision and sampling schemes on patterns of nucleotide polymorphism for species with molecular hyperdiversity.Semantic proximity Read ↗

The confounding effects of population structure, genetic diversity and the sampling scheme on the detection and quantification of population size changes.Semantic proximity Read ↗

Patterns of DNA sequence diversity and genetic structure after a range expansion: lessons from the infinite-island model.Semantic proximity Read ↗

The aggregate site frequency spectrum for comparative population genomic inference.Semantic proximity Read ↗

Exact calculation of the expected SFS in structured populations.Semantic proximity Read ↗

The effect of subdivision on variation at multi-allelic loci under balancing selection.Semantic proximity Read ↗

On the demographic history of chimpanzees and some consequences of integrating population structure in chimpanzees and other great apesSemantic proximity Read ↗

Impact of sampling schemes on demographic inference: an empirical study in two species with different mating systems and demographic histories.Semantic proximity Read ↗

Geographic sampling scheme as a determinant of the major axis of genetic variation in principal components analysis.Semantic proximity Read ↗

The effects of local selection, balanced polymorphism and background selection on equilibrium patterns of genetic diversity in subdivided populations.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.