Article
Free energy landscapes of a highly structured beta-hairpin peptide and its single mutant.
The Journal of chemical physics - 28 Oct 2008
Kim Eunae, Yang Changwon, Jang Soonmin, Pak Youngshang
Abstract excerpt
We investigated the free energy landscapes of a highly structured beta-hairpin peptide (MBH12) and a less structured peptide with a single mutation of Tyr6 to Asp6 (MBH10). For the free energy mapping, starting from an extended conformation, the replica exchange molecular dynamic simulations for two beta-hairpins were performed using a modified version of an all-atom force field employing an implicit solvation...
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