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Article

SNAP: a web-based tool for identification and annotation of proxy SNPs using HapMap.

Bioinformatics (Oxford, England) - 15 Dec 2008

Johnson Andrew D, Handsaker Robert E, Pulit Sara L, Nizzari Marcia M, O'Donnell Christopher J, de Bakker Paul I W

Abstract excerpt

SUMMARY: The interpretation of genome-wide association results is confounded by linkage disequilibrium between nearby alleles. We have developed a flexible bioinformatics query tool for single-nucleotide polymorphisms (SNPs) to identify and to annotate nearby SNPs in linkage disequilibrium (proxies) based on HapMap. By offering functionality to generate graphical plots for these data, the SNAP server will...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 18974171
DOI: 10.1093/bioinformatics/btn564
PMCID: PMC2720775

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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