Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Insertion-deletion polymorphisms (indels) as genetic markers in natural populations.

BMC genetics - 22 Jan 2008

Väli Ulo, Brandström Mikael, Johansson Malin, Ellegren Hans

Abstract excerpt

BACKGROUND: We introduce the use of short insertion-deletion polymorphisms (indels) for genetic analysis of natural populations. RESULTS: Sequence reads from light shot-gun sequencing efforts of different dog breeds were aligned to the dog genome reference sequence and gaps corresponding to indels were identified. One hundred candidate markers (4-bp indels) were selected and genotyped in unrelated dogs (n = 7)...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Alleles
Share to Chromosome Mapping
Share to Dogs

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genetic Markers

Share to INDEL Mutation

Share to Polymorphism, Genetic

Share to Species Specificity

Share to Wolves

Source

Open in PubMed Open full text

Identifiers

PMID: 18211670
DOI: 10.1186/1471-2156-9-8
PMCID: PMC2266919

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Insertion-deletion polymorphisms (indels) as genetic markers in natural populations.PMID 18211670Read ↗

Systematically identifying genetic signatures including novel SNP-clusters, nonsense variants, frame-shift INDELs, and long STR expansions that potentially link to unknown phenotypes existing in dog breeds.Semantic proximity Read ↗

Whole genome resequencing of the Iranian native dogs and wolves to unravel variome during dog domestication.Semantic proximity Read ↗

DoGSD: the dog and wolf genome SNP database.Semantic proximity Read ↗

An analysis of the genomic architecture of the worldwide Irish Wolfhound dogs.Semantic proximity Read ↗

Short Insertion and Deletion Discoveries via Whole-Genome Sequencing of 101 Thoroughbred Racehorses.Semantic proximity Read ↗

Genome-wide characterization of insertion and deletion variation in chicken using next generation sequencing.Semantic proximity Read ↗

Effective population size, extended linkage disequilibrium and signatures of selection in the rare dog breed lundehund.Semantic proximity Read ↗

Bottlenecks and selective sweeps during domestication have increased deleterious genetic variation in dogs.Semantic proximity Read ↗

The legacy of domestication: accumulation of deleterious mutations in the dog genome.Semantic proximity Read ↗

Genome-wide signatures of population bottlenecks and diversifying selection in European wolves.Semantic proximity Read ↗

Genetic Rescue of the Highly Inbred Norwegian Lundehund.Semantic proximity Read ↗

Large-scale SNP genotyping with canine buccal swab DNA.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.