Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Nonneutral GC3 and retroelement codon mimicry in Phytophthora.

Journal of molecular evolution - 1 Oct 2006

Jiang Rays H Y, Govers Francine

Abstract excerpt

Phytophthora is a genus entirely comprised of destructive plant pathogens. It belongs to the Stramenopila, a unique branch of eukaryotes, phylogenetically distinct from plants, animals, or fungi. Phytophthora genes show a strong preference for usage of codons ending with G or C (high GC3). The presence of high GC3 in genes can be utilized to differentiate coding regions from noncoding regions in the genome. We...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Base Composition
Share to Codon
Share to Gene Dosage

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genes, Plant

Share to Molecular Mimicry

Share to Open Reading Frames

Share to Phytophthora

Share to Retroelements

Source

Identifiers

PMID: 16955239
DOI: 10.1007/s00239-005-0211-3

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 2 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Nonneutral GC3 and retroelement codon mimicry in Phytophthora.PMID 16955239Read ↗

Codon usage biases of transposable elements and host nuclear genes in Arabidopsis thaliana and Oryza sativa.Semantic proximity Read ↗

Comparative Analysis of the Codon Usage Pattern in the Chloroplast Genomes of Gnetales Species.Semantic proximity Read ↗

Genomewide comparative analysis of codon usage bias in three sequenced Jatropha curcas.Semantic proximity Read ↗

Codon usage pattern and genetic diversity in chloroplast genomes of Panicum species.Semantic proximity Read ↗

The nucleotide usages significantly impact synonymous codon usage in Mycoplasma hyorhinis.Semantic proximity Read ↗

Vertebrate codon bias indicates a highly GC-rich ancestral genome.Semantic proximity Read ↗

OcculterCut: A Comprehensive Survey of AT-Rich Regions in Fungal Genomes.Semantic proximity Read ↗

GC content variation in angiosperm genomes reveals GC-biased gene conversion.Semantic proximity Read ↗

Variation in global codon usage bias among prokaryotic organisms is associated with their lifestyles.Semantic proximity Read ↗

Genome-Wide Analysis of Codon Usage Bias in Epichloë festucae.Semantic proximity Read ↗

Global Genetic Diversity, Phylogenetic Relationships and Codon Usage Bias of Stagonosporopsis Species Causing Gummy Stem BlightSemantic proximity Read ↗

New insights into the interplay between codon bias determinants in plants.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.