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Article

OcculterCut: A Comprehensive Survey of AT-Rich Regions in Fungal Genomes.

Genome biology and evolution - 3 Jul 2016

Testa Alison C, Oliver Richard P, Hane James K

Abstract excerpt

We present a novel method to measure the local GC-content bias in genomes and a survey of published fungal species. The method, enacted as "OcculterCut" (https://sourceforge.net/projects/occultercut, last accessed April 30, 2016), identified species containing distinct AT-rich regions. In most fungal taxa, AT-rich regions are a signature of repeat-induced point mutation (RIP), which targets repetitive DNA and...

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Identifiers

PMID: 27289099
DOI: 10.1093/gbe/evw121
PMCID: PMC4943192

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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