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Article

Kangaroo--a pattern-matching program for biological sequences.

BMC bioinformatics - 31 Jul 2002

Betel Doron, Hogue Christopher W V

Abstract excerpt

BACKGROUND: Biologists are often interested in performing a simple database search to identify proteins or genes that contain a well-defined sequence pattern. Many databases do not provide straightforward or readily available query tools to perform simple searches, such as identifying transcription binding sites, protein motifs, or repetitive DNA sequences. However, in many cases simple pattern-matching searches...

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PMID: 12150718
DOI: 10.1186/1471-2105-3-20
PMCID: PMC119856

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