Article
MODBASE, a database of annotated comparative protein structure models, and associated resources.
Nucleic acids research - 1 Jan 2004
Pieper Ursula, Eswar Narayanan, Braberg Hannes, Madhusudhan M S, Davis Fred P, Stuart Ashley C, Mirkovic Nebojsa, Rossi Andrea, Marti-Renom Marc A, Fiser Andras, Webb Ben, Greenblatt Daniel, Huang Conrad C, Ferrin Thomas E, Sali Andrej
Abstract excerpt
MODBASE (http://salilab.org/modbase) is a relational database of annotated comparative protein structure models for all available protein sequences matched to at least one known protein structure. The models are calculated by MODPIPE, an automated modeling pipeline that relies on the MODELLER package for fold assignment, sequence-structure alignment, model building and model assessment...
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