Article

Pangenomic analysis reveals pathogen-specific regions and novel effector candidates in <i>Fusarium oxysporum</i> f. sp. <i>cepae</i>

2017-09-30

Abstract excerpt

A reference-quality assembly of Fusarium oxysporum f. sp. cepae (Foc), the causative agent of onion basal rot has been generated along with genomes of additional pathogenic and non-pathogenic isolates. Phylogenetic analysis confirmed a single origin of the Foc pathogenic lineage. Genome alignments with other F. oxysporum ff. spp. and non pathogens revealed high levels of syntenic conservation of core chromosom...

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Literature Corpus work: fad1661c-a63c-593d-8d83-9c8fe85c34cd
DOI: 10.1101/182238

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