Article

Genome-based source attribution using a one health <i>Escherichia coli</i> isolate collection from 2013-23 in Scotland

2025-11-25

Abstract excerpt

<h4>ABSTRACT</h4> Random Forest based source attribution models were developed from a ‘one health’ resource comprising 4,230 high-quality whole genome assemblies from E. coli . These were isolated from a wide range of sources, predominantly originating in Scotland, including wastewater, livestock, food, and clinical infections of humans and dogs. Using these models, we derived a probabilistic assignment of E. c...

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Literature Corpus work: f998ec0e-3385-5b79-8ae7-e363a35b2a23
DOI: 10.1101/2025.11.25.25340865

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