Article

A comparative study of metagenomics analysis pipelines at the species level

2016-10-15

Abstract excerpt

Many metagenomics classification tools have been developed with the rapid growth of the metagenomics field. However, the classification of closely related species remains a challenge for this field. Here, we compared MetaPhlAn2, kallisto and Kraken for their performances in two metagenomics settings, human metagenomics and environmental metagenomics. Our comparative study showed that kallisto demonstrated higher s...

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Literature Corpus work: f6e9e6bd-cd70-5c05-bfd3-b3881fd8e08c
DOI: 10.1101/081141

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