Article

Assembly, annotation, and comparison of Macrophomina phaseolina isolates from strawberry and other hosts

2019-10-04

Abstract excerpt

<title>Abstract</title> <p>Background: Macrophomina phaseolina is a fungal plant pathogen with a broad host range, but one genotype was shown to exhibit host preference/specificity on strawberry. This pathogen lacked a high-quality genome assembly and annotation, and little was known about genomic differences among isolates from different hosts. <h4>Results:</h4> We used PacBio sequencing and Hi-C scaffolding to...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: f45a0e1f-8d93-5cb5-9cf5-a73d3abb4aee
DOI: 10.21203/rs.2.9364/v4

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Assembly, annotation, and comparison of Macrophomina phaseolina isolates from strawberry and other hostsDOI 10.21203/rs.2.9364/v4Read

Population genomics of Macrophomina spp. reveals cryptic host specialization and evidence for meiotic recombinationSemantic proximity Read

Population genomics of <i>Macrophomina</i> spp. reveals cryptic host specialization and evidence for meiotic recombinationSemantic proximity Read

Phenotypic Variability and Genetic Diversity of the Pathogenic Fungus Macrophomina phaseolina from Several Hosts and Host Specialization in Strawberry.Semantic proximity Read

Pathogenesis-related proteins are evolutionarily conserved across diploid and octoploid Fragaria speciesSemantic proximity Read

Intra-Species Genomic Variation in the Pine Pathogen <em>Fusarium Circinatum</em>Semantic proximity Read

Draft genome sequence of a Fusarium proliferatum isolate obtained from small cardamom, Elettaria cardamomumSemantic proximity Read

Wide variation in virulence and genetic diversity of binucleate Rhizoctonia isolates associated with root rot of strawberry in Western Australia.Semantic proximity Read

<i>De novo</i> assembly and phasing of dikaryotic genomes from two isolates of <i>Puccinia coronata</i> f. sp. <i>avenae</i> , the causal agent of oat crown rustSemantic proximity Read

Disease Resistance Genetics and Genomics in Octoploid StrawberrySemantic proximity Read

<i>De novo</i> genome assembly of <i>Geosmithia morbida</i> , the causal agent of thousand cankers diseaseSemantic proximity Read

A chromosome-level genome assembly of <i>Thecaphora frezzii</i> , cause of peanut smut, reveals the largest genome among the true smut fungiSemantic proximity Read

Emerging phytopathogen Macrophomina phaseolina: biology, economic importance and current diagnostic trends.Semantic proximity Read