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Haplotype-phased and chromosome-level genome assembly of <i>Puccinia polysora</i> , a giga-scale fungal pathogen causing southern corn rust

2022-05-19

Abstract excerpt

Rust fungi are characterized by large genomes with high repeat content and have two haploid nuclei in most life stages, which makes achieving high-quality genome assemblies challenging. Here, we described a pipeline using HiFi reads and Hi-C data to assemble a gigabase-sized fungal pathogen, Puccinia polysora f.sp. zeae , to haplotype-phased and chromosome-scale. The final assembled genome is 1.71 Gbp, with ~850...

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Literature Corpus work
ea73924e-db8d-53e1-96ab-539d5cf353c8
DOI
10.1101/2022.05.18.492400
Open publication

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Haplotype-phased and chromosome-level genome assembly of <i>Puccinia polysora</i> , a giga-scale fungal pathogen causing southern corn rustDOI 10.1101/2022.05.18.492400
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