Article

Unsupervised outlier detection applied to SARS-CoV-2 nucleotide sequences can identify sequences of common variants and other variants of interest

2022-05-17

Abstract excerpt

As of June 2022, the GISAID database contains more than one million SARS-CoV-2 genomes, including several thousand nucleotide sequences for the most common variants such as delta or omicron. These SARS-CoV-2 strains have been collected from patients around the world since the beginning of the pandemic. We start by assessing the similarity of all pairs of nucleotide sequences using the Jaccard index and principal c...

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Literature Corpus work: e42551cb-6d62-5dcd-bce4-573f35e84673
DOI: 10.1101/2022.05.16.492178

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Unsupervised outlier detection applied to SARS-CoV-2 nucleotide sequences can identify sequences of common variants and other variants of interestDOI 10.1101/2022.05.16.492178Read

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