Article

In-silico DNA barcoding surpasses whole genome sequencing for species identification from vector surveillance pools

2025-11-05

Abstract excerpt

<title>Abstract</title> <p>Mosquito borne diseases are responsible for over 600,000 deaths annually, mainly in sub-Saharan countries. Mosquito surveillance is a crucial element of vector control programmes to assure they remain effective. This study focused on optimizing the use of the MinION sequencer for interrogating mosquito pools from surveillance programmes, with simplified bioinformatic workflows for use i...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: e2ebb11a-49f1-5db8-a8fa-9713384cf6bf
DOI: 10.21203/rs.3.rs-7651154/v1

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

In-silico DNA barcoding surpasses whole genome sequencing for species identification from vector surveillance poolsDOI 10.21203/rs.3.rs-7651154/v1Read

Metabarcoding mosquitoes: MinION sequencing of bulk samples gives accurate species profiles for vector surveillance (Culicidae)Semantic proximity Read

Flexible and cost-effective genomic surveillance of <i>P. falciparum</i> malaria with targeted nanopore sequencingSemantic proximity Read

Using deep amplicon sequencing as a molecular xenomonitoring approach for detecting filarial nematodes in biting arthropod vectorsSemantic proximity Read

High-throughput barcoding method for the genetic surveillance of insecticide resistance and species identification in Anopheles gambiae complex malaria vectorsSemantic proximity Read

A Short‐Read Amplicon Sequencing Protocol and Bioinformatic Pipeline for Ecological Surveillance of Dipteran Disease VectorsSemantic proximity Read

Proof of concept: Malaria rapid diagnostic tests and massively parallel sequencing for surveillance of molecular markers of antimalarial resistance in Bissau, Guinea-Bissau during 2014-2017Semantic proximity Read

A targeted amplicon sequencing panel to simultaneously identify mosquito species and Plasmodium presence across the entire Anopheles genusSemantic proximity Read

Tracking arboviruses, their transmission vectors and potential hosts by nanopore sequencing of mosquitoesSemantic proximity Read

Bioinformatics Methods in Modern Malaria Research: Tools, Pipelines, and Gaps in ApplicationSemantic proximity Read

Whole Genome Sequencing Contributions and Challenges in Disease Reduction Focused on MalariaSemantic proximity Read

Overlap Extension Barcoding for the Next Generation Sequencing and Genotyping of Plasmodium falciparum in Individual Patients in Western KenyaSemantic proximity Read