Article

Comprehensive variant and haplotype landscapes of 50,500 global SARS-CoV-2 isolates and accelerating accumulation of country-private variant profiles

2020-07-09

Abstract excerpt

Understanding the genetic etiology of COVID-19 requires a comprehensive understanding of the variant and haplotype landscape of all reported genomes of SARS-COV-2, the causative virus of the disease. Country-, state/region- and possibly even city-private variant profiles may contribute to varied disease exemplifications and fatality rates observed across the globe along with host factors such as age, ethnicity and...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: daf1a013-cc32-54f6-a93d-667ff364940b
DOI: 10.1101/2020.07.09.193722

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Comprehensive variant and haplotype landscapes of 50,500 global SARS-CoV-2 isolates and accelerating accumulation of country-private variant profilesDOI 10.1101/2020.07.09.193722Read

Seasonal effects decouple SARS-CoV-2 haplotypes worldwideSemantic proximity Read

Contrasting Epidemiology and Population Genetics of COVID-19 Infections Defined by Multilocus Genotypes in SARS-CoV-2 Genomes Sampled Globally.Semantic proximity Read

Contrasting epidemiology and population genetics of COVID-19 infections defined with 74 polymorphic loci in SARS-CoV-2 genomes sampled globallySemantic proximity Read

Intra-host Variation and Evolutionary Dynamics of SARS-CoV-2 Population in COVID-19 PatientsSemantic proximity Read

Comprehensive Genome Analysis of 6,000 USA SARS-CoV-2 Isolates Reveals Haplotype Signatures and Localized Transmission Patterns by State and by CountrySemantic proximity Read

Landscape of SARS-CoV-2 genomic surveillance, public availability extent of genomic data, and epidemic shaped by variants: a global descriptive studySemantic proximity Read

Sequence Analysis of 20,453 SARS-CoV-2 Genomes from the Houston Metropolitan Area Identifies the Emergence and Widespread Distribution of Multiple Isolates of All Major Variants of ConcernSemantic proximity Read

Worldwide SARS-CoV-2 haplotype distribution in early pandemic.Semantic proximity Read

Genomic Surveillance for SARS-CoV-2 Variants: Circulation of Omicron Lineages — United States, January 2022–May 2023Semantic proximity Read

Worldwide SARS-COV-2 haplotype distributionSemantic proximity Read

The impact of super-spreaders in COVID-19: mapping genome variation worldwideSemantic proximity Read

Global Geographic and Temporal Analysis of SARS-CoV-2 Haplotypes Normalized by COVID-19 Cases During the PandemicSemantic proximity Read