Back to search

Article

Dynamic co-expression modular network analysis of bHLH transcription factors regulation in the potato spindle tuber viroid-tomato pathosystem

2023-11-15

Abstract excerpt

Viroids, minimalist plant pathogens, present significant threats to crops by causing severe diseases. The use of high-throughput sequencing technologies for analyzing the transcriptomes of viroid-infected host plants has yielded informative information on gene regulation by these pathogens, however a complete understanding of the transcriptome data suffers from the inclusion of numerous genes of unknown function....

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work
d62bd0b7-93bc-5a9e-9afd-58c812327a3d
DOI
10.1101/2023.11.10.566618
Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest
Interactive article relationship graphSelect a related publication card to move it into the centre and load its closest explainable connections. Solid lines are source-backed structured connections. Dashed lines are semantic discovery signals and are not scientific evidence.
Dynamic co-expression modular network analysis of bHLH transcription factors regulation in the potato spindle tuber viroid-tomato pathosystemDOI 10.1101/2023.11.10.566618
An integrative approach: using transcriptomic data and network analysis of transcriptional reprogramming in tomato response to PSTVd variantsSemantic proximity
Integrated Transcriptomic and Metabolomic Profiling Reveals the Antagonistic and Synergistic Crosstalk During Co-Infection of Potato Virus Y and Potato Spindle Tuber ViroidSemantic proximity
Exploring the Genetic Networks of Hlb Tolerance in Citrus: Insights Across Species and TissuesSemantic proximity
Co-optation of Transcription Factors Drives Evolution of Quantitative Disease Resistance Against a Necrotrophic PathogenSemantic proximity
StCoExpNet: a global co-expression network analysis facilitates identifying genes underlying agronomic traits in potatoes.Semantic proximity
Transcriptional reprogramming of transcription factors and transcriptional regulators in Citrus sinensis during pathogen infectionsSemantic proximity
Cell-type-specific response in host plants to the co-infection by sweet potato virusesSemantic proximity
Time-resolved single-cell and spatial gene regulatory atlas of plants under pathogen attackSemantic proximity
Time-Course Transcriptome Analysis Reveals Distinct Transcriptional Regulatory Networks in Resistant and Susceptible Grapevine Genotypes in Response to White Rot.Semantic proximity
Architecture of genome-wide transcriptional regulatory network reveals dynamic functions and evolutionary trajectories in <i>Pseudomonas syringae</i>Semantic proximity
Grapevine Red Blotch Virus Induces Haplotype-specific Genetic and Epigenetic ResponsesSemantic proximity
Comparative Transcriptome Profiling of Nicotiana benthamiana Plants Infected with Potato Mop-Top Virus and Its Mutant Lacking a Gene for the 8K Protein Underlines the Role of Chloroplasts During Infection.Semantic proximity
Select a neighboring publication to make it the new centre.