Article

Random Walk with Restart on multilayer networks: from node prioritisation to supervised link prediction and beyond

2023-10-20

Abstract excerpt

<h4>Background</h4> Biological networks have proven invaluable ability for representing biological knowledge. Multilayer networks, which gather different types of nodes and edges in multiplex, heterogeneous and bipartite networks, provide a natural way to integrate diverse and multi-scale data sources into a common framework. Recently, we developed MultiXrank, a Random Walk with Restart algorithm able to explore...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: cbb51674-31e1-5719-9a35-6142e9825335
DOI: 10.1101/2023.10.18.562848

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Random Walk with Restart on multilayer networks: from node prioritisation to supervised link prediction and beyondDOI 10.1101/2023.10.18.562848Read

Random Walk with Restart on multilayer networks: from node prioritisation to supervised link prediction and beyondSemantic proximity Read

Application of network diffusion approaches to drug screenings: A perspective on multilayered networks derived from cell lines and drugsSemantic proximity Read

Random Walk With Restart on Multiplex and Heterogeneous Biological NetworksSemantic proximity Read

Benchmarking network propagation methods for disease gene identificationSemantic proximity Read

HGPEC: a Cytoscape app for prediction of novel disease-gene and disease-disease associations and evidence collection based on a random walk on heterogeneous network.Semantic proximity Read

Random walk with restart on multiplex and heterogeneous biological networks.Semantic proximity Read

Laplacian normalization and random walk on heterogeneous networks for disease-gene prioritization.Semantic proximity Read

Network diffusion on multiple-layers: current approaches and integrative analysis of Rheumatoid Arthritis data.Semantic proximity Read

Crosstalkr: An open-source R package to facilitate drug target identificationSemantic proximity Read

multiDEGGs: a multi-omic differential network analysis package for biomarker discovery and predictive modelingSemantic proximity Read

Heterogeneous Network Edge Prediction: A Data Integration Approach to Prioritize Disease-Associated GenesSemantic proximity Read

PhenoGeneRanker: A Tool for Gene Prioritization Using Complete Multiplex Heterogeneous NetworksSemantic proximity Read