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The Lithuanian reference genome LT1 - a human <i>de novo</i> genome assembly with short and long read sequence and Hi-C data

2021-04-05

Abstract excerpt

We present LT1, the first high-quality human reference genome from the Baltic States. LT1 is a female de novo human reference genome assembly constructed using 57× of ultra-long nanopore reads and 47× of short paired-end reads. We also utilized 72 Gb of Hi-C chromosomal mapping data to maximize the assembly’s contiguity and accuracy. LT1’s contig assembly was 2.73 Gbp in length comprising of 4,490 contigs with an...

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Literature Corpus work
ba659c4c-9ed1-5b94-8a2a-0111de5fa48c
DOI
10.1101/2021.04.05.438426
Open publication

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