Article

Gene2Vec: Distributed Representation of Genes Based on Co-Expression

2018-03-22

Abstract excerpt

Existing functional description of genes are categorical, discrete, and mostly through manual process. In this work, we explore the idea of gene embedding, distributed representation of genes, in the spirit of word embedding. From a pure data-driven fashion, we trained a 300 dimension vector representation of all human genes, using gene co-expression patterns in 984 data sets from the GEO databases. These vectors...

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Literature Corpus work: b6e6db0b-b11e-5543-b7a2-49b118c44235
DOI: 10.1101/286096

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