Article

TCGA-Assembler 2: Software Pipeline for Retrieval and Processing of TCGA/CPTAC Data

2017-11-05

Abstract excerpt

<h4>Motivation</h4> The Cancer Genome Atlas (TCGA) program has produced huge amounts of cancer genomics data providing unprecedented opportunities for research. In 2014, we developed TCGA-Assembler (Zhu et al, 2014), a software pipeline for retrieval and processing of public TCGA data. In 2016, TCGA data were transferred from the TCGA data portal to the Genomic Data Commons (GDC), which is supported by a differen...

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Literature Corpus work: b698863a-aec1-5d52-be9d-b071a0a904dc
DOI: 10.1101/214320

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