Article

Assessing the potential of culture-independent 16S rRNA microbiome analysis in disease diagnostics: the example of Dianthus gratianopolitanus and Robbsia andropogonis

2019-12-01

Abstract excerpt

The goal of this study was to determine if culture-independent 16S rRNA sequencing of plant-associated microbiomes could facilitate disease diagnosis of cheddar pinks (Dianthus gratianopolitanus) with symptoms of leaf spotting at a Virginia nursery. The microbiome composition of cheddar pinks at the same nursery and at a second nursery in the absence of any disease outbreak was determined as well. After the pathog...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: b5a820ab-ff0a-5ee9-bed8-1eb35dfc7df4
DOI: 10.1007/s10658-019-01850-8

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Assessing the potential of culture-independent 16S rRNA microbiome analysis in disease diagnostics: the example of Dianthus gratianopolitanus and Robbsia andropogonisDOI 10.1007/s10658-019-01850-8Read

Complete genome sequences of bacterial pathogens in the UK Plant Health Risk RegisterSemantic proximity Read

A Review of Available eDNA Sampling Methods to Detect Plant Pathogenic Organisms in Horticultural SettingsSemantic proximity Read

Exploiting generic platform technologies for the detection and identification of plant pathogensSemantic proximity Read

Genomic insights into <i>Ceratobasidium</i> sp. associated with vascular streak dieback of woody ornamentals in the United States using a metagenomic sequencing approachSemantic proximity Read

Distinct microbiota assembly and functional patterns revealed by comparative analysis of disease resistant and susceptible tobacco (Nicotiana tabacum) varietiesSemantic proximity Read

Modern approaches for early detection of forest pathogens are sorely needed in the United StatesSemantic proximity Read

Selective enrichment of specific bacterial taxa in downy mildew-affected spinach: Comparative analysis in laboratory and field conditionsSemantic proximity Read

The impact of high throughput sequencing on plant health diagnosticsSemantic proximity Read

Genomic Insights into a Multispecies Bacterial Pathogen Complex Driving Bacterial Blotch in White Button MushroomsSemantic proximity Read

Infection of <i>Plasmodiophora brassicae</i> changes the fungal endophyte community of tumourous stem mustard roots as revealed by high-throughput sequencing and culture-dependent methodsSemantic proximity Read

Emergence of a New Population of Rathayibacter toxicus: An Ecologically Complex, Geographically Isolated Bacterium.Semantic proximity Read

Genotypic Identification of Trees Using DNA Barcodes and Microbiome Analysis of Rhizosphere Microbial Communities.Semantic proximity Read