Article

Integration of system phenotypes in microbiome networks to identify candidate synthetic communities: a study of the grafted tomato rhizobiome

2019-12-13

Abstract excerpt

<h4>ABSTRACT</h4> Understanding factors influencing microbial interactions, and designing methods to identify key taxa, are complex challenges for achieving microbiome-based agriculture. Here we study how grafting and the choice of rootstock influence root-associated fungal communities in a grafted tomato system. We studied three tomato rootstocks (BHN589, RST-04-106 and Maxifort) grafted to a BHN589 scion and pr...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 9c42b216-4ef8-5dc8-8eff-57a27485c0c3
DOI: 10.1101/2019.12.12.874966

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Integration of system phenotypes in microbiome networks to identify candidate synthetic communities: a study of the grafted tomato rhizobiomeDOI 10.1101/2019.12.12.874966Read

Genomic insights and biocontrol potential of ten bacterial strains from the tomato core microbiomeSemantic proximity Read

Soil-derived bacterial root commensals induce systemic alterations of defence-related secondary metabolism and response in tomato whole plants for favoring resistance against Fusarium wiltSemantic proximity Read

Patching the Leak or Rebuilding the Boat? Evaluating Targeted Probiotic Cyanobacteria and Microbiome Transplants to Counteract Antibiotic‑Driven Rhizosphere Dysbiosis in Tomato under <i>Xanthomonas perforans</i> PressureSemantic proximity Read

Genomic Insights and Biocontrol Potential of Ten Bacterial Strains from the Tomato Core MicrobiomeSemantic proximity Read

Responses of root microbiome and metabolome are linked to crop disease severitySemantic proximity Read

Linking genomic and phenotypic traits to interaction outcomes in a synthetic phyllosphere communitySemantic proximity Read

Successive plant growth amplifies genotype-specific assembly of the tomato rhizosphere microbiome.Semantic proximity Read

Acinetobacter enrichment shapes composition and function of the bacterial microbiota of field-grown tomato plantsSemantic proximity Read

Fusaric acid mediates the assembly of disease-suppressive rhizosphere microbiota via induced shifts in plant root exudates.Semantic proximity Read

Disease-induced Changes in Plant Microbiome Assembly and Functional AdaptationSemantic proximity Read

Defense hormones modulate root microbiome diversity and composition in tomatoSemantic proximity Read

Phyllosphere microbiome assembly in wild green foxtail: designing synthetic communities for domesticated millet protectionSemantic proximity Read