Back to search

Article

ResFinderFG v2.0: a database of antibiotic resistance genes obtained by functional metagenomics

2022-10-19

Abstract excerpt

<h4>ABSTRACT</h4> Metagenomics can be used to monitor the spread of antibiotic resistance genes (ARGs). ARGs found in databases such as ResFinder and CARD primarily originate from culturable and pathogenic bacteria, while ARGs from non-culturable and non-pathogenic bacteria remain understudied. Functional metagenomics is based on phenotypic gene selection and can identify ARGs from non-culturable bacteria with a...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work
9ac52c9f-d1b2-5482-b7ac-cf58e59292e3
DOI
10.1101/2022.10.19.512667
Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest
Interactive article relationship graphSelect a related publication card to move it into the centre and load its closest explainable connections. Solid lines are source-backed structured connections. Dashed lines are semantic discovery signals and are not scientific evidence.
ResFinderFG v2.0: a database of antibiotic resistance genes obtained by functional metagenomicsDOI 10.1101/2022.10.19.512667
ResFinderFG v2.0: a database of antibiotic resistance genes obtained by functional metagenomicsSemantic proximity
Utilizing Metagenomic Data and Bioinformatic Tools for Elucidating Antibiotic Resistance Genes in EnvironmentSemantic proximity
ResFinder - an open online resource for identification of antimicrobial resistance genes in next-generation sequencing data and prediction of phenotypes from genotypes.Semantic proximity
PRAP: Pan Resistome analysis pipeline.Semantic proximity
Global landscape of antibiotic resistance genes in the human gut microbiome MAGSemantic proximity
Global ocean resistome revealed: exploring Antibiotic Resistance Genes (ARGs) abundance and distribution on TARA oceans samples through machine learning toolsSemantic proximity
Data-mining of Antibiotic Resistance Genes Provides Insight into the Community Structure of Ocean MicrobiomeSemantic proximity
Metagenomic insights into the distribution of antibiotic resistome between the gut-associated environments and the pristine environmentsSemantic proximity
The resistome of common human pathogensSemantic proximity
Sequencing methods to study the microbiome with antibiotic resistance genes in patients with pulmonary infectionsSemantic proximity
A Roadmap of The Human Body ResistomeSemantic proximity
Combining functional and structural genomics to track antibiotic resistance genes in mobile elements in clinical bacterial strainsSemantic proximity
Select a neighboring publication to make it the new centre.